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中国农学通报 ›› 2007, Vol. 23 ›› Issue (6): 1-1.

所属专题: 生物技术 畜牧兽医

• 畜牧 动物医学 蚕 蜂 •    下一篇

牛病毒性腹泻病毒HB-DCZ株NS2-3区基因克隆及序列分析

赵月兰, 郭红斌,张磊,秦建华,张宁,张保宁   

  • 出版日期:2007-06-05 发布日期:2007-06-05

Cloning and Sequence Analysis of Genetic Variation on NS2-3 of Bovine Viral Diarrhea Virus HB-DCZ Strain

Zhao Yuelan, Guo Hongbin, Zhang Lei, Qin Jianhua, Zhang Ning, Zhang Baoning   

  • Online:2007-06-05 Published:2007-06-05

摘要: 【目的】对牛病毒性腹泻病毒HB-DCZ株NS2-3区基因进行克隆及序列分析,为阐明本病致病机理,更好的控制BVDV感染、流行提供理论依据。【方法】以牛病毒性腹泻病毒河北分离株(HB-DCZ)基因组RNA为模板,扩增BVDV HB-DCZ株基因组NS2-3片段cDNA。将PCR产物克隆后进行PCR及双酶切鉴定。克隆产物进行序列测定及分析。【结果】HB-DCZ cDNA体外扩增获得特异性条带,大小约为665bp,表明该分离毒株基因组中无插入序列。PCR产物克隆,提取重组质粒,扩增获得特异性的DNA条带,长度约为665bp,用EcoRⅠ和Hind Ⅲ双酶切,获得两条DNA片段,长度分别为2600bp和702bp左右,与理论值相符。序列测定结果表明,克隆得到的NS2-3重要区扩增片段共665核苷酸,NS2-3重要区的蛋白质由208个氨基酸残基组成。HB-DCZ毒株NS2-3重要区核苷酸序列与已公开发表的BVDV其他毒株相比的同源性依次为184株99.1%,ZM195株97.4%,Osloss株92.3%,C24V株77%,NADL株76.4%。HB-DCZ在NS2-3扩增区域中既没有外源序列的插入,也没有基因重组、重排或缺失,但存在某些核苷酸的替换。【结论】HB-DCZ与Osloss株、国内的184株、ZM195株遗传距离较近,与C24V株、NADL株遗传距离较远。HB-DCZ株应为BVDV Ib基因亚型。

关键词: 扩张蛋白, 扩张蛋白

Abstract: 【Objective】Bovine Viral Diarrhoea-Mucosal Disease Virus HB strain was a field strain isolated from a dairy cows flock in HeBei province . The study were progressed in order to realizing characters of HB strain, providing theory base for illuminating pathogeny, controlling infection and prevalence of BVDV;【Method】Genetic Variation on NS2-3 of Bovine viral diarrhea Virus HB-DCZ strain were amplified by RT-PCR. The product of PCR was cloned into pMD18-T vector, and then transfected into JM109. The recombinant plasmids were extracted and amplified by PCR and identificated by EcoRⅠand Hind Ⅲ enzyme digestion. The nucleotide sequence of the isolated virus NS2-3 was sequenced and amino acid sequence was inferred. Sequence analysis was performed with the aid of DNAstar softerware;【Results】The result showed that the obtained fragment was approximate 665bp by RT-PCR. There was no insertion in the isolated virus genome. EcoRⅠand Hind Ⅲ digestion of the recombinant plasmids resulted in two bands with sizes 702bp and 2635bp, indicating the specificity of the PCR. The cloned NS2-3 segment of HB-DCZ strain contains 665bp nucleotides and 208 amino acid. The homologies of nucleotide sequence of NS2-3 gene of HB-DCZ strain with other BVDV strains were 99.1%(184),97.4% (ZM195), 92.3% (Osloss), 77% (OregonC24V ), 76.4% (NADL), respectively. The HB-DZC virus strain had no exogenous sequence insertion, gene recombination, gene rearrangement or gene deficiency. However, some nucleotide sequences were replaced. 【Conclusion】The HB-DZC was closed related to BVDV strains Osloss, 184, ZM195 nor the strains C24V, NADL; All the above results proved this virus was BVDV and which belongs to subtype Ib.

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