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中国农学通报

中国农学通报 ›› 2012, Vol. 28 ›› Issue (31): 131-136.

• 林学 园艺 园林 • 上一篇    下一篇

谢贺 高玉龙 桂毅杰 宋中邦 樊龙江 肖炳光 卢秀萍   

  • 收稿日期:2012-03-13 修回日期:2012-05-15 出版日期:2012-11-05 发布日期:2012-11-05
  • 基金资助:

    云南省科技厅项目;云南省烟草公司项目

Optimizaiton of IMP PCR System Applied in Tobacco

  • Received:2012-03-13 Revised:2012-05-15 Online:2012-11-05 Published:2012-11-05

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摘要：

为满足烟草遗传分析的需求，建立稳定的IMP标记扩增方法，对IMP分子标记体系进行了优化。本研究以烟草DNA为模板，利用Li-cor 4300凝胶分离系统，优化了模板、Mg2+、dNTP、聚合酶浓度等IRD荧光引物扩增反应体系主要参数，建立分析IMP标记的平台。结果显示，影响烟草荧光引物扩增反应最大的因素是dNTPs和引物浓度，反应体系对Mg2+浓度的要求较宽泛，同时，不同的引物对各因素的浓度要求也有差异。最终确定20 μL反应体系中，模板DNA 70 ng，Mg2+浓度2.0 mmol/L，dNTPs为0.2 mmol/L，rTaq DNA聚合酶1.5 U，引物浓度均为1 μmol/L。该体系扩增条带稳定，重复性好，适合烟草遗传多样性分析。

关键词: 地理信息系统, 地理信息系统

Abstract:

The amplification between two adjacent MITEs was called Inter-MITE polymorphism (IMP). To meet the demand of tobacco genetic analysis and establishment of stable IMP amplification method, the IMP PCR system was optimized using IRD primer. In this study, every major amplification parameter such as template, Mg2+, dNTP, rTaq concentration were optimized analysis by Li-cor 4300 system based on tobacco genome DNA. Result showed the optimized PCR-amplifications were performed in a 20 μL volume containing 70 ng template DNA, 2.0 mmol/L of MgCl2+, 0.2 mmol/L of dNTPs, 1.0 μmol/L of labeled primer and 1.5 units of rTaq DNA polymerase. The result demonstrates that the optimized IMP method is stable robust and can be effectively applied in Tobacco genetic diversity analysis.

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