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中国农学通报 ›› 2012, Vol. 28 ›› Issue (32): 107-112.

所属专题: 资源与环境

• 水产 渔业 • 上一篇    下一篇

利用微卫星标记分析建鲤种质资源的研究

李建林 唐永凯 李红霞 俞菊华   

  • 收稿日期:2012-03-23 修回日期:2012-05-03 出版日期:2012-11-15 发布日期:2012-11-15
  • 基金资助:

    公益性行业(农业)科研专项,国家科技计划“863”项目,基本科研业务费专项资金。

Germplasm Resources Analysis in Cyprinus carpio var. jian by Microsatellite Markers

  • Received:2012-03-23 Revised:2012-05-03 Online:2012-11-15 Published:2012-11-15

摘要:

为了评估和合理利用建鲤种质资源。从建鲤繁育群体中随机选取185尾鱼,用20个微卫星位点进行遗传多样性分析。结果表明:20个微卫星位点在该群体中所检测到的等位基因片段长度在114~316 bp,共检测出156个等位基因和402种基因型,各位点等位基因数为5~13个,平均7.8个,基因型数10~44种,平均20.1种;各位点观察杂合度(Ho)、期望杂合度(He)分别在0.346~0.978和0.619~0.880之间,平均分别为0.6434和0.757;所检测的20个位点多态信息含量(PIC)在0.552~0.868之间,平均为0.7253,都属于高度多态位点(PIC>0.5)。实验结果表明,该建鲤繁育群体多态信息含量丰富,遗传多样性水平较高,具有较大的选育潜力。群体内平均固定系数(FIS)为0.1479,说明该建鲤群体存在杂合子缺失现象。根据个体间的遗传距离构建的聚类图可以清楚地显示每个个体之间的遗传差异,这可为建鲤保种和繁殖配组提供依据,避免近交现象。

关键词: 诊断, 诊断

Abstract:

For evaluating and rational utilization the germplasm resources of Cyprinus carpio var. jian. 185 individuals were randomly sampled from breeding population of C. carpio var. jian, and genetic diversity were analyzed using 20 microsatellite markers. The results showed that the DNA fragment length of the alleles ranged from 124-310 bp, a total of 156 alleles and 172 genotypes were detected in the population by 20 microsatellite loci, the number of allele and genotype at each locus ranged from 5 to 13 and from 10 to 44,with the average of 7.8 and 20.1 respectively. The observed and expected heterozygosity varied from 0.346 to 0.978 and from 0.619 to 0.880, with the average 0.6434 and 0.757 respectively. The polymorphic information content (PIC) was 0.552 to 0.868, and the average was 0.7253, all the loci were in a high polymorphism degree (PIC>0.5). The results indicated rich polymorphism information content and large genetic diversity in the population, and this introduced the breeding population of C. carpio var. jian has a large selection potential. The average fixation index (FIX) was 0.1479 indicated that heterozygote deficiency existed in the population. The UPGAM dendrogram based on the genetic distance could clearly showed the genetic diversity of all the individuals, and this could provided the basis for breed conservation, chosen breeding pairs and avoid in breeding.

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