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中国农学通报 ›› 2013, Vol. 29 ›› Issue (18): 38-44.doi: 10.11924/j.issn.1000-6850.2012-2674

所属专题: 生物技术 小麦

• 农学 农业基础科学 • 上一篇    下一篇

小麦Cyp450基因的电子克隆与生物信息学分析

武安泉 王俊生 张玉玺 殷贵鸿   

  • 收稿日期:2012-08-01 修回日期:2012-10-11 出版日期:2013-06-25 发布日期:2013-06-25

Analysis of Electronic Clone and Bioinformatics on the Cytochrome P450 Gene in Wheat (Triticum aestivum L.)

  • Received:2012-08-01 Revised:2012-10-11 Online:2013-06-25 Published:2013-06-25

摘要: 为获得对小麦Cyp450基因及其编码蛋白质的理化性质与结构特性等,利用电子克隆方法克隆了一个新的小麦Cyp450基因,并对其编码的蛋白质进行了生物信息学分析。结果表明,该基因全长2155 bp,编码511个氨基酸;该蛋白序列的N端存在一个显著信号肽序列,属于CypX超家族,该蛋白定位于细胞质中,属于分泌途径中的信号肽蛋白,含有多个不同的磷酸化位点;二级结构以α螺旋(占48.14%)和无规则卷曲为主(占33.86%),存在5个不稳定区,在85-511位处形成一个较大的球形蛋白域。该蛋白与大麦、二穗短柄草、水稻和高粱的同源Cyp450蛋白相似性较高,进化距离较近。获得了一个新的小麦细胞色素P450基因,并分析了其编码蛋白质的序列特性,为进一步实验克隆和研究其功能提供了理论基础。

关键词: 响应, 响应

Abstract: In order to acquired the cytochrome P450 protein gene (Cyp450) in wheat and physicochemical properties, structural characteristics and relevant information of the corresponding protein, the ectroniccloning technology and bioinformatics methods were utilized for its cDNA and the corresponding amid acid sequence as well as physical and chemical properties, subcellular localization, senior structural and its functional domains of the protein. The results showed that the length of cDNA sequence was 2155 bp, encoding 511 amino acids. In N-terminal of the protein seuence there was a significant signal peptide, it belonged to CypX surperfamily. The protein located in the cytoplasm was signal peptide protein in secretory pathway; it contained multiple different phosphorylation sites. The α-helix (accounted for 48.14%) and random coil (accounted for 33.68%) was main secondary structure, it had five disorder region and a potential globulin area in 85-511 amid acid of the protein sequence. The protein had higher sequece indentities with that from other gramineae plants including Hordeum vulgare, brachypodium distachyon, oryza sativa and zea may, the evolution distance among them was near. A new Cyp450 gene in wheat was cloned, and some sequence characters of the corresponding protein were studied, these results provided theory basis for the gene cloning by PCR technique and functional analysis.