水稻白叶枯病抗性基因和相关因子研究利用进展

doi:10.11924/j.issn.1000-6850.casb2021-0941

中国农学通报 ›› 2022, Vol. 38 ›› Issue (30): 91-99.doi: 10.11924/j.issn.1000-6850.casb2021-0941

所属专题：生物技术；植物保护；水稻

水稻白叶枯病抗性基因和相关因子研究利用进展

李舟¹^,²(), 杨雅云²(), 戴陆园², 张斐斐², 阿新祥², 董超², 王斌², 汤翠凤²

¹云南大学资源植物研究院,昆明 650504
²云南省农业科学院生物技术与种质资源研究所,云南省农业生物技术重点实验室,农业部西南作物基因资源与种质创制重点实验室,农业部云南稻种资源科学观测实验站,昆明 650223

收稿日期:2021-09-30 修回日期:2022-03-28 出版日期:2022-10-25 发布日期:2022-10-27
通讯作者: 杨雅云
作者简介:李舟,男,1997 年出生,云南昆明人,硕士研究生,研究方向：水稻抗病育种。通信地址：650504 云南省昆明市盘龙区白塔路汇都国际C-A,Tel：13577063626,E-mail： 13577063626@163.com。
基金资助:
国家自然科学基金“水稻毫糯扬抗白叶枯病新基因的克隆与作用机理分析”(31760375);国家自然科学基金“云南疣粒野生稻白叶枯病抗性相关蛋白鉴定及功能分析”(31160274);国家自然科学基金“TFIIIA型转录因子OsZFPH介导的水稻抗白叶枯病机理解析”(32160455);云南重大科技专项“云南农业种质资源数字化应用”(202002AA100007)

Rice Bacterial Blight Resistance Genes and Resistance-related Factors: A Review on Research and Utilization

LI Zhou¹^,²(), YANG Yayun²(), DAI Luyuan², ZHANG Feifei², A Xinxiang², DONG Chao², WANG Bin², TANG Cuifeng²

¹Economic Plant Institute, Yunnan University, Kunming 650504
²Biotechnology and Germplasm Resources Institute, Yunnan Academy of Agricultural Sciences/Yunnan Provincial Key Lab of Agricultural Biotechnology/Key Lab of Southwestern Crop Gene Resources and Germplasm Innovation, Ministry of Agriculture and Rural Affairs/Scientific Observation for Rice Germplasm Resources of Yunnan, Ministry of Agriculture and Rural Affairs, Kunming 650223

Received:2021-09-30 Revised:2022-03-28 Online:2022-10-25 Published:2022-10-27
Contact: YANG Yayun

摘要/Abstract

摘要：

水稻白叶枯病严重制约水稻生产,抗病基因的发掘与利用是目前防治该病害最环保有效的手段。为高效发掘、研究和利用抗白叶枯病基因,本文概述了白叶枯病菌与水稻的互作机制,总结了抗白叶枯病基因的定位与克隆现状并对其功能类型加以分类,归纳了抗病相关因子的研究进展。针对目前抗白叶枯病基因的研究进展缓慢且概述性研究报道相对滞后的现状,提出研究展望,认为应更深入研究水稻抗白叶枯病基因的定位克隆与利用,并大力探究抗病基因与抗病相关因子的协同作用关系。

关键词: 水稻, 白叶枯病, 抗病基因, 相关因子, 研究利用

Abstract:

Bacterial blight severely restricts the production of rice. The discovery and utilization of disease-resistant genes is currently the most environment-friendly and effective way to control the disease. In order to efficiently discover, study and utilize bacterial blight resistance genes, this paper summarized the interaction mechanism between bacterial blight and rice, concluded the location and cloning status of bacterial blight resistance genes, and classified their functional types. Research progress on disease resistance-related factors was reviewed. In view of the current situation that the research progress of bacterial blight resistance genes is slow and the overview research reports are relatively lagging behind, we put forward the research prospect, and believe that more in-depth research should be done on the location cloning and utilization of rice bacterial blight resistance genes, and the synergistic relationship between genes and disease resistance-related factors should be explored.

Key words: rice, bacterial blight, disease resistance gene, resistance-related factors, research and utilization

中图分类号:

S511

李舟, 杨雅云, 戴陆园, 张斐斐, 阿新祥, 董超, 王斌, 汤翠凤. 水稻白叶枯病抗性基因和相关因子研究利用进展[J]. 中国农学通报, 2022, 38(30): 91-99.

LI Zhou, YANG Yayun, DAI Luyuan, ZHANG Feifei, A Xinxiang, DONG Chao, WANG Bin, TANG Cuifeng. Rice Bacterial Blight Resistance Genes and Resistance-related Factors: A Review on Research and Utilization[J]. Chinese Agricultural Science Bulletin, 2022, 38(30): 91-99.

图/表 1

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[50]	阮辉辉, 严成其, 安德荣, 等. 疣粒野生稻抗白叶枯病新基因xa32(t)的鉴定及其分子标记定位(英文)[J]. 西北农业学报, 2008(6):170-174.
[51]	S KORINSAK S S P S. Identification of microsatellite markers (SSR) linked to a new bacterial blight resistance gene xa33(t) in rice cultivar 'Ba7'[J]. Maejo international journal of science and technology, 2009, 3(2):235-247.
[52]	KUMAR P N, SUjATHA K, LAHA G S, et al. Identification and fine-mapping of Xa33, a novel gene for resistance to Xanthomonas oryzae pv. oryzae[J]. Phytopathology, 2012, 102(2):222-228. doi: 10.1094/PHYTO-03-11-0075 URL
[53]	CHEN S, LIU X, ZENG L, et al. Genetic analysis and molecular mapping of a novel recessive gene xa34(t) for resistance against Xanthomonas oryzae pv. oryzae.[J]. Theoretische und angewandte Genetik, 2011, 122(7).
[54]	郭嗣斌, 张端品, 林兴华. 小粒野生稻抗白叶枯病新基因的鉴定与初步定位[J]. 中国农业科学, 2010, 43(13):2611-2618.
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[56]	H BHASIN D B S R. New PCR-based sequence-tagged site marker for bacterial blight resistance gene (t) of rice[J]. Molecular breeding volume, 2012, 30: 607-611.
[57]	ZHANG F, ZHUO D L, ZHANG F, et al. Xa39, a novel dominant gene conferring broad-spectrum resistance to Xanthomonas oryzae pv.oryzae in rice[J]. Plant pathology, 2015, 64(3):568-575. doi: 10.1111/ppa.12283 URL
[58]	KIM S M, SUH J P, QIN Y, et al. Identification and fine-mapping of a new resistance gene, Xa40, conferring resistance to bacterial blight races in rice (Oryza sativa L.)[J]. Theoretical and applied genetics, 2015, 128(10):1933-1943. doi: 10.1007/s00122-015-2557-2 URL
[59]	HUTIN M, SABOT F, GHESQUIERE A, et al. A knowledge-based molecular screen uncovers a broad-spectrum OsSWEET14 resistance allele to bacterial blight from wild rice[J]. Plant journal, 2015, 84(4):694-703. doi: 10.1111/tpj.13042 URL
[60]	BUSUNGU C, TAURA S, SAKAGAMI J I, et al. High-resolution mapping and characterization of xa42, a resistance gene against multiple Xanthomonas oryzae pv. oryzae races in rice (Oryza sativa L.)[J]. Breed science, 2018, 68(2):188-199. doi: 10.1270/jsbbs.17094 URL
[61]	KIM S, REINKE R F. A novel resistance gene for bacterial blight in rice, Xa43(t) identified by GWAS, confirmed by QTL mapping using a bi-parental population[J]. Plos one, 2019, 14(2).

基因位点	无毒菌株（小种）	供体品种	染色体	连锁标记	蛋白类型	参考文献
Xa1*	日本菌株X-17	黄玉、Java14	4	C600(0 cM)、XNpb235(0 cM)、U08750(1.5 cM）	NLR	[16]
Xa2*	日本菌株X-17	Te-tep	4	HZR950-5~HZR970-4(190 kb)、 G235~C600(0.2 cM)	NLR	[17]
Xa3/Xa26*	印尼菌株T7174、 T7174等	早生爱国3、明恢63等	11	XNbp181(2.3 cM)、RM224(0.21 cM)、 Y6855R(1.47 cM)	RLK	[18]
Xa4*	菲律宾菌株PX025(1)	TKM-6、IR20、IR22	11	XNpb181(1.7 cM)、XNpb78(1.7 cM)	WAK	[19]
xa5*	菲律宾菌株PX025(1)	DZ192、Ir1545-339	5	RG556(<1 cM)、RG207(<1 cM)、 RM122(0.7 cM)、RM390(0.4 cM)	TFIIA	[20⇓-22]
Xa7*	菲律宾菌株PX061(1)	DV85、DV86、DZ78	6	G1091(6.0 cM)、AFLP31-10(3 cM)、GDSSR02~RM20593(0.21 cM)	EXECUTOR	[23]
xa8	菲律宾菌株PX061(1)	PI231128	7	RM214(19.9 cM）		[24]
Xa10*	菲律宾4个小种	Cas209	11	O072000(5.3 cM)、M491~M419(0.28 cM)	EXECUTOR	[25,26]
Xa11	印尼菌株T7174	IR944-102-2-3	3	RM347(2.0 cM)、KUX11(1.0 cM)		[27]
Xa12	印尼菌系Xo-7306(V)	黄玉、Java14	4	-		[28]
xa13*	菲律宾小种6	BJ1	8	RZ28(5.1 cM)、G136(3.8 cM)、RP7~ST12(9.2 kb)	SWEET	[22,29]
Xa14*	菲律宾小种5	TN1	4	RG620(20.1 cM)、HZR970-8~HZR988-1(0.68 cM)	NLR	[30]
基因位点	无毒菌株（小种）	供体品种	染色体	连锁标记	蛋白类型	参考文献
xa15	日本小种Ⅰ、Ⅱ、Ⅲ、Ⅳ	M41诱变体	-	-		[31]
Xa16	日本小种Ⅶ	Tetep	-	-		[32]
Xa17	日本小种Ⅱ	阿苏稔	-	-		[33]
Xa18	缅甸菌株	IR24、密阳23、丰锦	-	-		[34]
xa19	6个菲律宾小种	IR24的诱变体XM5	-	-		[35]
xa20	6个菲律宾小种	IR24的诱变体XM6	-	-		[36]
Xa21*	菲律宾小种1、2、4、6	长药野生稻	11	RG103(0 cM)	RLK	[22,37]
Xa22(t)	菲律宾菌株PXO61	扎昌龙	11	CR543(7.1 cM)、RZ536(10.7 cM)、Y6855RA(0.4 cM)、G2132B(0.7 cM)		[38]
Xa23*	PXO99 (菲律宾小种6)	普通野生稻	11	C189(0.8 cM)、CP02662(1.3 cM)	EXECUTOR	[39]
xa24(t)*	菲律宾小种 1、2、4、6	DV86	2	RM14222~RM14224(10 kb)	未知蛋白	[40]
xa25*	菲律宾小种9	明恢63	12	G1314(7.3 cM)、R887(3.0 cM)、MZ2(0.38 cM)、MZ7(0.06 cM)	SWEET	[41]
Xa25(t)	菲律宾小种1、3、4	明恢63、无性系突变体HX3	4	RM6748(9.3 cM)、RM1153(3.0 cM)		[42]
Xa27*	菲律宾小种2、5	小粒野生稻	6	M964~M1197(0.052 cM)	EXECUTOR	[43,44]
xa28(t)	菲律宾小种2	Lotasail	-	-		[45]
Xa29(t)	菲律宾小种1	药用野生稻	1	C904~R596(1.3 cM)		[46]
Xa30(t)	PXO99 (菲律宾小种6)	普通野生稻Y238	11	03STS(2.0 cM)		[47]
Xa31(t)*	OS105	扎昌龙	4	G235~C600(0.2 cM)	NLR	[48]
Xa32(t)	菲律宾小种1、4~9	澳洲野生稻C4064	11	ZCK24(0.5 cM)~RM6293(1.5 cM)		[49]
xa32(t)	PXO99 (菲律宾小种6)	疣粒野生稻	12	RM20A(1.7 cM)		[50]
xa33(t)	泰国小种TXO16	Ba7	6	RM30~RM400		[51]
Xa33	IRI-VIII	普通野生稻、 IRGC105710	7	RMWR7.1(0.9 cM)~RMWR7.6(1.2 cM)		[52]
xa34(t)	中国小种5226	BG1222	1	RM10929~BGID25(204 kb)		[53]
Xa35(t)	菲律宾小种PXO61、PXO112等	小粒野生稻	11	RM7654(1.1 cM)~RM6293(0.7 cM)		[54]
Xa36(t)	P6和C5	C4059	11	RM224~RM2136(4.5 cM)		[55]
Xa38	IRI-VII	普通野生稻IRGC81825	4	RM317~RM562(35 cM)		[56]
Xa39	P6和CV	PSBRC66	11	RM26985~DM13(97.4 kb)		[57]
Xa40	朝鲜菌株K1、K2,K3,K3a	IR65482-7-216-1-2	11	RM27320~ID55.WA18-5(80 kb)		[58]
xa41(t)*	BAI3	O.glaber-rima	11	RM27320~RM27355(220 kb)	SWEET	[59]
xa42	6个菲律宾小种、 6个日本小种	IR24、	3	RM20572~DT46(34.8 kb)		[60]
Xa43	17个韩国菌株K3a(HP01009）等	JMAGIC系亲本P8	11	IBb27os11_14~S_BB11.ssr_9(119 kb)		[61]
基因位点	无毒菌株（小种）	供体品种	染色体	连锁标记	蛋白类型	参考文献
xa44	24个韩国菌株K3a(HP01009）等	JMAGIC系亲本P6	11	#46.g0689400~5.RM27318(120 kb)		[62]
Xa45*	AXO1974、T7174	O.nivara	4	53120-F4b-53120-R4b	NLR	[63]
xa45	菌株PbXo7	IRGC102600B	8	C8.26737175~C8.26818765(80 kb)		[64]
Xa46	IV族隔离株GD9315	突变株H120	11	RM26981~RM26984(65.34 kb)		[65]
Xa47(t)*	C5、C9、P6、PB等	G252	11	R13I14~13rbq-71		[66]

基因位点	无毒菌株（小种）	供体品种	染色体	连锁标记	蛋白类型	参考文献
Xa1*	日本菌株X-17	黄玉、Java14	4	C600(0 cM)、XNpb235(0 cM)、U08750(1.5 cM）	NLR	[16]
Xa2*	日本菌株X-17	Te-tep	4	HZR950-5~HZR970-4(190 kb)、 G235~C600(0.2 cM)	NLR	[17]
Xa3/Xa26*	印尼菌株T7174、 T7174等	早生爱国3、明恢63等	11	XNbp181(2.3 cM)、RM224(0.21 cM)、 Y6855R(1.47 cM)	RLK	[18]
Xa4*	菲律宾菌株PX025(1)	TKM-6、IR20、IR22	11	XNpb181(1.7 cM)、XNpb78(1.7 cM)	WAK	[19]
xa5*	菲律宾菌株PX025(1)	DZ192、Ir1545-339	5	RG556(<1 cM)、RG207(<1 cM)、 RM122(0.7 cM)、RM390(0.4 cM)	TFIIA	[20⇓-22]
Xa7*	菲律宾菌株PX061(1)	DV85、DV86、DZ78	6	G1091(6.0 cM)、AFLP31-10(3 cM)、GDSSR02~RM20593(0.21 cM)	EXECUTOR	[23]
xa8	菲律宾菌株PX061(1)	PI231128	7	RM214(19.9 cM）		[24]
Xa10*	菲律宾4个小种	Cas209	11	O072000(5.3 cM)、M491~M419(0.28 cM)	EXECUTOR	[25,26]
Xa11	印尼菌株T7174	IR944-102-2-3	3	RM347(2.0 cM)、KUX11(1.0 cM)		[27]
Xa12	印尼菌系Xo-7306(V)	黄玉、Java14	4	-		[28]
xa13*	菲律宾小种6	BJ1	8	RZ28(5.1 cM)、G136(3.8 cM)、RP7~ST12(9.2 kb)	SWEET	[22,29]
Xa14*	菲律宾小种5	TN1	4	RG620(20.1 cM)、HZR970-8~HZR988-1(0.68 cM)	NLR	[30]
基因位点	无毒菌株（小种）	供体品种	染色体	连锁标记	蛋白类型	参考文献
xa15	日本小种Ⅰ、Ⅱ、Ⅲ、Ⅳ	M41诱变体	-	-		[31]
Xa16	日本小种Ⅶ	Tetep	-	-		[32]
Xa17	日本小种Ⅱ	阿苏稔	-	-		[33]
Xa18	缅甸菌株	IR24、密阳23、丰锦	-	-		[34]
xa19	6个菲律宾小种	IR24的诱变体XM5	-	-		[35]
xa20	6个菲律宾小种	IR24的诱变体XM6	-	-		[36]
Xa21*	菲律宾小种1、2、4、6	长药野生稻	11	RG103(0 cM)	RLK	[22,37]
Xa22(t)	菲律宾菌株PXO61	扎昌龙	11	CR543(7.1 cM)、RZ536(10.7 cM)、Y6855RA(0.4 cM)、G2132B(0.7 cM)		[38]
Xa23*	PXO99 (菲律宾小种6)	普通野生稻	11	C189(0.8 cM)、CP02662(1.3 cM)	EXECUTOR	[39]
xa24(t)*	菲律宾小种 1、2、4、6	DV86	2	RM14222~RM14224(10 kb)	未知蛋白	[40]
xa25*	菲律宾小种9	明恢63	12	G1314(7.3 cM)、R887(3.0 cM)、MZ2(0.38 cM)、MZ7(0.06 cM)	SWEET	[41]
Xa25(t)	菲律宾小种1、3、4	明恢63、无性系突变体HX3	4	RM6748(9.3 cM)、RM1153(3.0 cM)		[42]
Xa27*	菲律宾小种2、5	小粒野生稻	6	M964~M1197(0.052 cM)	EXECUTOR	[43,44]
xa28(t)	菲律宾小种2	Lotasail	-	-		[45]
Xa29(t)	菲律宾小种1	药用野生稻	1	C904~R596(1.3 cM)		[46]
Xa30(t)	PXO99 (菲律宾小种6)	普通野生稻Y238	11	03STS(2.0 cM)		[47]
Xa31(t)*	OS105	扎昌龙	4	G235~C600(0.2 cM)	NLR	[48]
Xa32(t)	菲律宾小种1、4~9	澳洲野生稻C4064	11	ZCK24(0.5 cM)~RM6293(1.5 cM)		[49]
xa32(t)	PXO99 (菲律宾小种6)	疣粒野生稻	12	RM20A(1.7 cM)		[50]
xa33(t)	泰国小种TXO16	Ba7	6	RM30~RM400		[51]
Xa33	IRI-VIII	普通野生稻、 IRGC105710	7	RMWR7.1(0.9 cM)~RMWR7.6(1.2 cM)		[52]
xa34(t)	中国小种5226	BG1222	1	RM10929~BGID25(204 kb)		[53]
Xa35(t)	菲律宾小种PXO61、PXO112等	小粒野生稻	11	RM7654(1.1 cM)~RM6293(0.7 cM)		[54]
Xa36(t)	P6和C5	C4059	11	RM224~RM2136(4.5 cM)		[55]
Xa38	IRI-VII	普通野生稻IRGC81825	4	RM317~RM562(35 cM)		[56]
Xa39	P6和CV	PSBRC66	11	RM26985~DM13(97.4 kb)		[57]
Xa40	朝鲜菌株K1、K2,K3,K3a	IR65482-7-216-1-2	11	RM27320~ID55.WA18-5(80 kb)		[58]
xa41(t)*	BAI3	O.glaber-rima	11	RM27320~RM27355(220 kb)	SWEET	[59]
xa42	6个菲律宾小种、 6个日本小种	IR24、	3	RM20572~DT46(34.8 kb)		[60]
Xa43	17个韩国菌株K3a(HP01009）等	JMAGIC系亲本P8	11	IBb27os11_14~S_BB11.ssr_9(119 kb)		[61]
基因位点	无毒菌株（小种）	供体品种	染色体	连锁标记	蛋白类型	参考文献
xa44	24个韩国菌株K3a(HP01009）等	JMAGIC系亲本P6	11	#46.g0689400~5.RM27318(120 kb)		[62]
Xa45*	AXO1974、T7174	O.nivara	4	53120-F4b-53120-R4b	NLR	[63]
xa45	菌株PbXo7	IRGC102600B	8	C8.26737175~C8.26818765(80 kb)		[64]
Xa46	IV族隔离株GD9315	突变株H120	11	RM26981~RM26984(65.34 kb)		[65]
Xa47(t)*	C5、C9、P6、PB等	G252	11	R13I14~13rbq-71		[66]

水稻白叶枯病抗性基因和相关因子研究利用进展

Rice Bacterial Blight Resistance Genes and Resistance-related Factors: A Review on Research and Utilization

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