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中国农学通报 ›› 2013, Vol. 29 ›› Issue (10): 11-17.doi: 10.11924/j.issn.1000-6850.2012-3872

所属专题: 生物技术

• 林学 园艺 园林 • 上一篇    下一篇

红花檵木实时荧光定量PCR分析内参基因的选择

张力 于晓英 符红艳 陈己任 李达 陈海霞   

  • 收稿日期:2012-11-29 修回日期:2013-01-06 出版日期:2013-04-05 发布日期:2013-04-05
  • 基金资助:
    DREB和XET基因聚合表达的分子基础;红花檵木叶色高温返青的分子机理研究

Reference Genes Selection for Real-time fluorescence quantitative PCR in L. chinense var. rubrum

  • Received:2012-11-29 Revised:2013-01-06 Online:2013-04-05 Published:2013-04-05

摘要: 实时荧光定量PCR(qRT-PCR)是目前基因定量表达分析的重要方法,而适宜内参基因的选择对目的基因表达特征的准确分析至关重要。本研究以红花檵木‘大叶红’( L. chinense var.Rubrum ‘Dayehong’)的芽、嫩茎、叶、花瓣、种子和愈伤组织为材料,采用qRT-PCR 技术比较了4个常用看家基因微管蛋白基因(α-tubulin)、肌动蛋白基因(β-actin)、18S 核糖体 RNA(18S rRNA)与甘油醛-3-磷酸-脱氢酶基因(GAPDH)的表达情况,结果表明:(1)4个看家基因均能特异扩增并显示较高的扩增效率;(2)经 geNorm 和 NormFinder 程序综合分析,当采用qRT-PCR分析红花檵木不同器官和组织中的基因表达差异时,以GAPDH表达最为稳定,可选择作为校正内参基因;在比较不同发育阶段的叶片及明暗处理的愈伤组织中的基因表达差异时,β-actin表达最为稳定,可以选择作为校正内参基因。

关键词: 城市化, 城市化

Abstract: Real-time fluorescence quantitative PCR(qRT-PCR) has been widely used in gene expression analysis to date, and selection of suitable reference genes for qRT-PCR according to specific experimental materials or conditions is very important for accurate normalization of target gene expression. However, the studies on reference genes have not been done in Loropetalurn, In this study, expression of four commonly used housekeeping genes such as α-tubulin , β-actin ,18S ribsomal RNA (18S rRNA) and glyceraldehyde-3-phosphate dehydrogenase (GAPDH) were assessed by qRT-PCR in various tissues (buds, young stems, leaves, petals ,seeds and callus) . All the candidate reference genes could amplify specifically with high efficiency in qRT-PCR reaction. To determine the expression stability of these genes, the data were determined by two commonly used applets(geNorm and NormFinder), which produced highly comparable results depending on the experimental parameters. GeNorm and NormFinder algorithms revealed that β-actin and GAPDH were both in the highest stability, and GAPDH could be used as a reference gene for various organs and tissues and β-actin for leaves at different stages and callus among diverse treatments.

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