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Chinese Agricultural Science Bulletin ›› 2012, Vol. 28 ›› Issue (1): 294-297.doi: 10.11924/j.issn.1000-6850.2011-2235

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Optimization of Sequence-Related Amplified Polymorphism Amplification System for Chinese Bayberry

  

  • Received:2011-08-01 Revised:2011-10-08 Online:2012-01-05 Published:2012-01-05

Abstract:

The aim was to establish SRAP-PCR amplification system which was suitable for Chinese Bayberry genome DNA. The optimized SRAP-PCR amplification system for Chinese bayberry was established by the orthogonal design. The results suggested that the order of factors which affect on the result of SRAP-PCR were Mg2+, template DNA, dNTPs, primers and Taq DNA polymerase. A suitable SRAP-PCR system for Chinese bayberry was that total 25 μL reaction system containing 2.5 mmol/L Mg2+, 50 ng template DNA, 0.25 mmol/L dNTPs, 0.15 μmol/L primers and 1.5 U Taq DNA polymerase could be able to amplified the most rich polymorphism and clear bands. The optimized SRAP-PCR system was tested on twelve Chinese bayberry germplasms and shown to be steady and reliable for molecular genetics research.