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Chinese Agricultural Science Bulletin ›› 2016, Vol. 32 ›› Issue (14): 37-43.doi: 10.11924/j.issn.1000-6850.casb15100062
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Wang Jie1, Xu Youxin2, Diao Qiyu1, Zhang Naifeng1
Received:2015-10-15
Revised:2016-04-26
Accepted:2015-12-25
Online:2016-05-17
Published:2016-05-17
Wang Jie,Xu Youxin,Diao Qiyu and Zhang Naifeng. Non-Mendelian Inheritance Patterns: Advances in Epigenetics and Its Application[J]. Chinese Agricultural Science Bulletin, 2016, 32(14): 37-43.
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URL: https://www.casb.org.cn/EN/10.11924/j.issn.1000-6850.casb15100062
| [1] Boissonnas CC, Jouannet P, Jammes H. Epigenetic disorders and male subfertility[J].Fertil Steril,2013,99(3):6246-6231. [2] Bird A. Perceptions of epigenetics[J].Nature,2007,447(7143):396-398. [3] Gastelo-Branco G, Bannister A J. The epigenetics of cancer: from noncoding RNAs to chromatin and beyond[J].Brief Funct Genomics,2013,12(3):161-163. [4] Toriello H V. What is new in the field of genetics[J].Adolesc Med State Art Rev,2013,24(1):43-56. [5] Brasset E, Chambeyron S. Epigenetics and transgenerational inheritance[J].Genome Biol,2013,14(5):306. [6] Bird A. DNA methylation patterns and epigenetic memory[J].Genes Dev,2002,16(1):6-21. [7] Goll M G, Bestor T H. Eukaryotic cytosine methyltrans-ferases[J].Annu Rev Biochem,2005,74:481-514. [8] Long H K, Blackledge N P, Klose R J. ZF-CxxC domain-containing proteins, CpG islands and the chromatin connection[J].Biochem Soc Trans,2013,41(3):727-740. [9] Nelissen E C, van Montfoot A P, Dumoulin J C, et al. Epigenetics and the placenta[J].Human Reproduction Update,2011,17(3):397-417. [10] Gokul G, Khosla S. DNA methylation and cancer[J].Subcell Biochem,2012,61(3):597-625. [11] Lee H S, Kim B H, Cho N Y, et al. Prognostic implications of and relationship between CpG island hypermethylation and repetitive DNA hypomethylation in hepatocellular carcinoma[J].Clin Cancer Res,2009,15:812-820. [12] Kamiyama H, Suzuki K, Maeda T, et al. DNA demethylation in normal colon tissue predicts predisposition to multiple cancers[J].Oncogene,2012,31(48):5029-5037. [13] Shao C, Sun W, Tan M, et al. Integrated, genome-wide screening for hypomethylated oncogenes in salivary gland adenoid cystic carcinoma[J].Clin Cancer Res,2011,17(13):4320-4330. [14] Ooi S K T, Bestor T H. The colorful history of active DNA demethylation[J].Cell,2008,133(7):1145-1148. [15] De Faveri L E, Hurst C D, Platt F M, et al. Putative tumour suppressor gene necdin is hypermethylated and mutated in human cancer[J].Br J Cancer,2013,108(6):1368-1377. [16] Waldmann T, Schneider R. Targeting histone modifications-epigenetics in cancer[J].Cell Biology,2013,25(2):184-189. [17] Mar B G, Bullinger L, Basu E, et al. Sequencing histone-modifying enzymes identifies UTX mutations in acute lymphoblastic leukemia[J].Leukemia,2012,26(8):1881-1883. [18] Strahl B D, Allis C D. The language of covalent histone modifications[J].Nature,2000,403(6765):41-45. [19] Jenuwein T, Allis C D. Translating the histone code[J].Science,2001,293(5532):1074-1080. [20] Theisen J W, Gucwa J S, Yusufzai T, et al. Biochemical analysis of histone deacetylase-independent transcriptional repression by MeCP2[J].The Journal of Biological Chemistry,2013,288(10):7096-7104. [21] Furumatsu T, Ozaki T. Epigenetic regulation in chondrogenesis[J].Acta Medica Okayama,2010,64(3):155-161. [22] 蒋智文,刘新光,周中军.组蛋白修饰调节机制的研究进展[J].生物化学与生物物理进展,2009(10):1252-1259. [23] Wolffe A P, Hayes J J. Chromatin disruption and modification[J].Nucleic Acids Research,1999,27(3):711-720. [24] David P F, Matthew J S. HDACs and their inhibitors in immunology: teaching anticancer drugs new tricks[J].Immunology and cell biology,2012,90(1):3-5. [25] Gupta S, Kim S Y, Artis S, et al. Histone methylation regulates memory formation[J].Journal of Neuroscience,2010,30(10):3589-3599. [26] Nilanjana C, Divya S, Mekonnen LD, et al. Histone H3 tail acetylation modulates ATP-dependent remodeling through multiple mechanisms[J].Nucleic Acids Research,2011,39(19):8378-8391. [27] Jiaxue Wu, Michael S Y. Huen, Lin-Yu Lu, et al. Histone ubiquitination associates with BRCA1–dependent DNA damage response[J].Molecular and Cellular Biology,2009,29(3):849-860. [28] Priscilla N, Peter C. Histone code pathway involving H3S28 phosphorylation and K27 acetylation activates transcription and antagonizes polycomb silencing[J]. Proc Natl Acad Sci USA,2011,108(7):2801-2806. [29] Banerjee T, Chakravarti D. A peek into the complex realm of histone phosphorylation[J].Molecular and Cellular Biology,2011,31(24):4858-4873. [30] Riddihough G, Pennisi E. The evolution of epigenetics[J].Science,2001,293(5532):1063. [31] Racki L R, Narlikar G J. ATP-dependent chromatin remodeling enzymes: two heads are not better, just different[J].Curr Opin Genet Dev,2008,18(2):137-144. [32] Wang GG, Allis CD, Chi P. Chromatin remodeling and cancer, part I: covalent histone modifications[J].Trends Mol Med,2007,13(9):363-372. [33] Barrett RM, Wood MA. Beyond transcription factors: The role of chromatin modifying enzymes in regulating transcription required for memory[J].Learn Mem,2008,15(7):460-467. [34] Taverna S D, Li H, Ruthenburg A J, et al. How chromatin-binding modules interpret histone modifications: Lessons from professional pocket pickers[J].Nat Struct Mol Biol,2007,14(11):1025-1040. [35] Kouzarides T. Chromatin modifications and their function[J].Cell, 2007,128(4):693-705. [36] Li B, Carey M, Workman J L. The role of chromatin during transcription[J].Cell,2007,128(4):707-719. [37] Gangaraju V K, Bartholomew B. Mechanisms of ATP dependent chromatin remodeling[J].Mutat Res,2007,618(1-2):3-17. [38] Peterson C L, Herskowitz I. Characterization of the yeast SWI1, SWI2, and SWI3 genes, which encode a global activator of transcription[J].Cell,1992,68(3):573-583. [39] Ponting C P, Oliver P L, Reik W. Evolution and functions of long noncoding RNAs[J].Cell,2009,136(4):629-641. [40] Zaratiegui M, Irvine D V, Martienssen R A. Noncoding RNAs and gene silencing[J].Cell,2007,128(4):763-776. [41] Mohammad F, Mondal T, Kanduri C. Epigenetics of imprinted long noncoding RNAs[J].Epigenetics,2009,4(5):277-286. [42] Ruvkun G. Molecular biology. Glimpses of a tiny RNA world[J].Science,2001,294(5543):797-799. [43] Ichimura A, Ruike Y, Terasawa K, et al. MicroRNAs and regulation of cell signaling[J]. Febs J,2011,278:1610-1618. [44] Ono K, Kuwabara Y, Han J H. MicroRNAs and cardiovascular disease[J]. Febs J,2011,278(10):1619-1633. [45] Pencheva N, Tavazoie S F. Control of metastatic progression by microRNA regulatory networks[J].Nat Cell Biol,2013,15(6):546-554. [46] Monroig P D, Calin G A. MicroRNA and epigenetics: diagnostic and therapeutic opportunities[J].Curr Pathobiol Rep,2013,1(1):43-52. [47] Jinek M, Doudna J A. A three-dimensional view of the molecular machinery of RNA interference[J].Nature, 2009,457(7228):405-412. [48] Moazed D. Small RNAs in transcriptional gene silencing and genome defense[J].Nature,2009,457(7228):413-420. [49] Bayne E H, Allshire R C. RNA-directed transcriptional gene silencing in mammals[J].Trends Genet,2005,21(7):370-373. [50] Kawasaki H, Taira K, Morris K V. siRNA induced transcriptional gene silencing in mammalian cells[J].Cell Cycle,2005,4(3):442-448. [51] Jones PA, Baylin S B. The fundamental role of epigenetic events in cancer[J].Nature reviews genetics,2002,3(6):415-428. [52] Jaenisch R, Bird A. Epigenetic regulation of gene expression: how the genome integrates intrinsic and environmental signals[J].Nature genetics,2003,33(4):245-254. [53] 徐硕琪.表观遗传学与肿瘤[J].畜牧与饲料科学,2010,31(2):144-145. [54] Kawasaki H, Abe H. Epigenetics in cancer and inflammation[J].Personalized Medicine Universe,2012,26(1):7-12. [55] Blelloch R, Gutkind J S. Epigenetics, noncoding RNAs, and cell signaling-crossroads in the regulation of cell fate decisions[J].Cell Biology,2013,25(2):149-151. [56] Schulz W A, Elo J P, Florl A R, et al. Genomewide DNA hypomethylation is associated with alterations on chromosome 8 in prostate carcinoma[J].Genes Chromosomes Cancer,2002,35(1):58-65. [57] Lee S H, Kim J, Kim W H, et al. Hypoxic silencing of tumor suppressor RUNX3 by histone modification in gastric cancer cells[J].Oncogene,2009,28(2):184-194. [58] 林刚,鲍时来,林巍,等.蛋白质甲基转移酶的结合蛋白在肺癌组织中的表达[J].中国热带医学,2010,10(12):1503-1504. [59] Widschwendter A, Mller H M, Fiegl H, et al. DNA methylation in serum and tumors of cervical cancer patients[J].Clin Cancer Res,2004,10(2):565-571. [60] Gu X, Sun J, Li S, et al. Oxidative stress induces DNA demethylation and histone acetylation in SH-SY5Y cells: potential epigenetic mechanisms in gene transcription in Aβ production[J].Neurobiol Aging,2013,34:1069-1079. [61] Migliore L, Coppedè F. Environmental-induced oxidative stress in neurodegenerative disorders and aging[J].Mutat Res,2009,674:73-84. [62] Mastroeni D, Grover A, Delvaux E, et al. Epigenetic mechanisms in Alzheimer’s disease[J].Neurobiol Aging,2011,32:1161-1180. [63] Leszek J, Sochocka M, G?siorowski K. Vascular factors and epigenetic modifications in the pathogenesis of Alzheimer''s disease[J].J Neurol Sci,2012,323:25-32. [64] Chouliaras L, Rutten B P, Kenis G, et al. Epigenetic regulation in the pathophysiology of Alzheimer’s disease[J]. Prog Neurobiol,2010,90(4):498-510. [65] Urdinquio R G, Sanchez-Mut J V, Esteller M. Epigenetic mechanisms in neurological diseases: genes, syndromes and therapies[J].Lancet Neurol,2009,8(11):1056-1072. [66] Wang S C, Oelze B, Schumacher A. Age-specific epigenetic drift in late-onset Alzheimer''s disease[J].PLoS One,2008,3(7):e2698. [67] Arab L, Sabbagh M N. Are certain lifestyle habits associated with lower Alzheimer’s disease risk? [J].J Alzheimers Dis,2010,20(3):785-794. [68] Choi S W, Mason J B. Folate status: effects on pathways of colorectal carcinogenesis[J].J Nutr, 2002,132(8):2413s-2418s. [69] Fuso A, Nicolia V, Cavallaro R A, et al. B-vitamin deprivation induces hyperhomocysteinemia and brain S-adenosylhomocysteine, depletes brain S-adenosylmethionine, and enhances PS1 and BACE expression and amyloid-beta deposition in mice[J].Mol Cell Neurosci,2008,37(4):731-746. [70] Lithner C U, Lacor P N, Zhao W Q, et al. Disruption of neocortical histone H3 homeostasis by soluble Ab: implications for Alzheimer ''s disease[J]. Neurobiol Aging,2013,34(9):2081-2090. [71] Weber C, Noels H. Atherosclerosis: current pathogenesis and therapeutic options[J].Nat Med,2011,17(11):1410-1422. [72] Mikaela M B, Ross T M, Anthony W R. Epigenetic modulation in the treatment of atherosclerotic disease[J].Fronries in Genetics,2014,364:1-7. [73] Hiltunen M O, Turunen M P, kinen T P, et al. DNA hypomethylation and methyltransferase expression in atherosclerotic lesions[J].Vasc Med,2002,7(1):5-11. [74] Castro R, Rivera I, Blom H J, et al. Homocysteine metabolism, hyperhomocysteinaemia and vascular disease: An overview[J].J Inherit Metab Dis,2006,29:3-20. [75] Libby P, Okamoto Y, Rocha V Z, et al. Inflammation in atherosclerosis: transition from theory to practice[J].Circ J,2010,74(2):213-220. [76] Jia L, Zhu L, Wang J Z, et al. Methylation of FOXP3 in regulatory T cells is related to the severity of coronary artery disease[J].Atherosclerosis,2013,228(2):346-352. [77] Zaina S, Heyn H, Carmona F J, et al. A DNA methylation map of human Atherosclerosis[J]. Circ Cardiovasc Genet,2014,7(5):692-700. [78] Leader J E, Wang C, Popov V M, et al. Epigenetics and the estrogen receptor[J].Ann N Y Acad Sci,2006,1089(1):73-87. [79] Myzak M C, Tong P, Dashwood W M, et al. Sulforaphane retards the growth of human PC-3 xenografts and inhibits HDAC activity in human subjects[J].Exp Biol Med(Maywood),2007,232(2):227-234. [80] Coban D, Milenkovic D, Chanet A, et al. Dietary curcumin inhibits atherosclerosis by affecting the expression of genes involved in leukocyte adhesion and transendothelial migration[J]. Mol Nutr Food Res,2012,56(8):1270-1281. [81] Dean L, McEntyre J. The Genetic Landscape of diabetes[J]. Bethesda(MD):National Center for Biotechnology Information 9US0,2004:1-135. [82] Singh A K, Sinha B. Advances in basal insulin therapy: lessons from current evidence[J].J Indian Med Assoc,2013,111(11):735-736,738-742. [83] Brietake S A. Oral antihyperglycemic treatment options for type 2 diabetes mellitus[J].Med Clin North Am,2015, 99(1):87-106. [84] Chakrabarti S K, Francis JM, Ziesmann SM, et al. Covalent histone modifications underlie the developmental regulation of insulin gene transcription in pancreatic beta cells[J].J Biol Chem,2003,278(26):23617-23623. [85] Fu L, Liu X, Niu Y, et al. Effects of high-fat diet and regular aerobic exercise on global gene expression in skeletal muscle of C57BL/6 mice[J].Metabolism,2012,61(2):146-152. [86] Shimizu K, Onishi M, Sugata E, et al. Disturbance of DNA methy1ation patterns in the early phase of hepatocarcinogenesis induced by a choline-deficient L-amino acid-defined diet in rats[J].Cancer sci,2007,98(9):1318-1322. [87] Ling C, Del Guerra S, Lupi R, et al. Epigenetic regulation of PPARGC1A in human type 2 diabetic islets and effect on insulin secretion[J]. Diabetologia,2008,51(4):615-622 [88] Francis J M, Chakrabarti S K, Garmey J, et al. Pdx-1 links histone H3-Lys-4 methylation to RNA polymerase Ⅱelongation during activation of insulin transcription[J]. J Bid Chem,2005,280(43):36244-36253. |
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