Chinese Agricultural Science Bulletin ›› 2025, Vol. 41 ›› Issue (3): 114-122.doi: 10.11924/j.issn.1000-6850.casb2024-0424
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YUE Kaixin(), WANG Jiaqi, LIU Naixin(
)
Received:
2024-06-27
Revised:
2024-08-15
Online:
2025-01-25
Published:
2025-01-20
YUE Kaixin, WANG Jiaqi, LIU Naixin. Transcriptome Analysis of Sugar Beet Seed Germination Response Under Drought Stress[J]. Chinese Agricultural Science Bulletin, 2025, 41(3): 114-122.
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URL: https://www.casb.org.cn/EN/10.11924/j.issn.1000-6850.casb2024-0424
Sample | Raw Data/bp | Clean Data/bp | Q20 | Q30 | GC | Unique Mapped | Total Mapped |
---|---|---|---|---|---|---|---|
CK0-1 | 4015136400 | 3908736301 | 3865132844(98.88%) | 3780811876 (96.73%) | 1752434279 (44.83%) | 20306745 (77.29%) | 86294 (0.33%) |
CK0-2 | 3452243700 | 3360921517 | 3324126022(98.91%) | 3253066000 (96.79%) | 1494551812 (44.47%) | 17606385 (77.77%) | 29516 (0.13%) |
CK0-3 | 4157282700 | 4054654609 | 4012874557(98.97%) | 3931194813 (96.96%) | 1810225173 (44.65%) | 21328121 (78.13%) | 38694 (0.14%) |
CK1-1 | 4908352500 | 4785188792 | 4734721755(98.95%) | 4636926883 (96.90%) | 2109856110 (44.09%) | 26332738 (81.81%) | 49342(0.15%) |
CK1-2 | 3741820200 | 3643599151 | 3603783236(98.91%) | 3527243074 (96.81%) | 1598639332 (43.88%) | 20060356 (81.78%) | 27542 (0.11%) |
CK1-3 | 3834366900 | 3734643359 | 3694382356(98.92%) | 3616869341 (96.85%) | 1641703431 (43.96%) | 20570774 (81.81%) | 24234 (0.10%) |
CK2-2 | 4148845800 | 4044849175 | 4001466558(98.93%) | 3917398794 (96.85%) | 1793615419 (44.34%) | 22300578 (82.03%) | 62088 (0.23%) |
CK2-3 | 4029155400 | 3928829095 | 3887089882(98.94%) | 3806141295 (96.88%) | 1745218024 (44.42%) | 21383028 (81.12%) | 113498(0.43%) |
T1-1 | 3889116300 | 3789447684 | 3748084608(98.91%) | 3668189438 (96.80%) | 1676717579 (44.25%) | 20745470 (81.31%) | 17916 (0.07%) |
T1-2 | 3815753400 | 3717906743 | 3677220879(98.91%) | 3598762386 (96.80%) | 1637289436 (44.04%) | 20357734 (81.34%) | 24192 (0.10%) |
T1-3 | 3579039600 | 3488414938 | 3450870514(98.92%) | 3378393988 (96.85%) | 1526231684 (43.75%) | 18975223 (80.81%) | 23938 (0.10%) |
T2-1 | 5526353100 | 5382089298 | 5320896703(98.86%) | 5200861905 (96.63%) | 2337616496 (43.43%) | 29350117 (81.01%) | 47594 (0.13%) |
T2-2 | 4746729600 | 4622904916 | 4572123977(98.90%) | 4471783961 (96.73%) | 2014963121 (43.59%) | 25370967 (81.52%) | 41824 (0.13%) |
T2-3 | 3836340900 | 3741758636 | 3702362953(98.95%) | 3623798346 (96.85%) | 1622487457 (43.36%) | 20456965 (81.24%) | 33038 (0.13%) |
Sample | Raw Data/bp | Clean Data/bp | Q20 | Q30 | GC | Unique Mapped | Total Mapped |
---|---|---|---|---|---|---|---|
CK0-1 | 4015136400 | 3908736301 | 3865132844(98.88%) | 3780811876 (96.73%) | 1752434279 (44.83%) | 20306745 (77.29%) | 86294 (0.33%) |
CK0-2 | 3452243700 | 3360921517 | 3324126022(98.91%) | 3253066000 (96.79%) | 1494551812 (44.47%) | 17606385 (77.77%) | 29516 (0.13%) |
CK0-3 | 4157282700 | 4054654609 | 4012874557(98.97%) | 3931194813 (96.96%) | 1810225173 (44.65%) | 21328121 (78.13%) | 38694 (0.14%) |
CK1-1 | 4908352500 | 4785188792 | 4734721755(98.95%) | 4636926883 (96.90%) | 2109856110 (44.09%) | 26332738 (81.81%) | 49342(0.15%) |
CK1-2 | 3741820200 | 3643599151 | 3603783236(98.91%) | 3527243074 (96.81%) | 1598639332 (43.88%) | 20060356 (81.78%) | 27542 (0.11%) |
CK1-3 | 3834366900 | 3734643359 | 3694382356(98.92%) | 3616869341 (96.85%) | 1641703431 (43.96%) | 20570774 (81.81%) | 24234 (0.10%) |
CK2-2 | 4148845800 | 4044849175 | 4001466558(98.93%) | 3917398794 (96.85%) | 1793615419 (44.34%) | 22300578 (82.03%) | 62088 (0.23%) |
CK2-3 | 4029155400 | 3928829095 | 3887089882(98.94%) | 3806141295 (96.88%) | 1745218024 (44.42%) | 21383028 (81.12%) | 113498(0.43%) |
T1-1 | 3889116300 | 3789447684 | 3748084608(98.91%) | 3668189438 (96.80%) | 1676717579 (44.25%) | 20745470 (81.31%) | 17916 (0.07%) |
T1-2 | 3815753400 | 3717906743 | 3677220879(98.91%) | 3598762386 (96.80%) | 1637289436 (44.04%) | 20357734 (81.34%) | 24192 (0.10%) |
T1-3 | 3579039600 | 3488414938 | 3450870514(98.92%) | 3378393988 (96.85%) | 1526231684 (43.75%) | 18975223 (80.81%) | 23938 (0.10%) |
T2-1 | 5526353100 | 5382089298 | 5320896703(98.86%) | 5200861905 (96.63%) | 2337616496 (43.43%) | 29350117 (81.01%) | 47594 (0.13%) |
T2-2 | 4746729600 | 4622904916 | 4572123977(98.90%) | 4471783961 (96.73%) | 2014963121 (43.59%) | 25370967 (81.52%) | 41824 (0.13%) |
T2-3 | 3836340900 | 3741758636 | 3702362953(98.95%) | 3623798346 (96.85%) | 1622487457 (43.36%) | 20456965 (81.24%) | 33038 (0.13%) |
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