
Chinese Agricultural Science Bulletin ›› 2021, Vol. 37 ›› Issue (12): 72-78.doi: 10.11924/j.issn.1000-6850.casb2020-0128
Special Issue: 生物技术
Previous Articles Next Articles
					
													Zhang Chengcai( ), Xiang Zengxu(
), Xiang Zengxu( )
)
												  
						
						
						
					
				
Received:2020-05-25
															
							
																	Revised:2020-07-27
															
							
															
							
																	Online:2021-04-25
															
							
																	Published:2021-05-13
															
						Contact:
								Xiang Zengxu   
																	E-mail:2018804280@njau.edu.cn;zxxiang@njau.edu.cn
																					CLC Number:
Zhang Chengcai, Xiang Zengxu. Test-tube Seedlings of Atractylodes lancea (Thunb.) DC: ISSR and MSAP Analysis[J]. Chinese Agricultural Science Bulletin, 2021, 37(12): 72-78.
Add to citation manager EndNote|Ris|BibTeX
URL: https://www.casb.org.cn/EN/10.11924/j.issn.1000-6850.casb2020-0128
| 引物 | 序列 | 
|---|---|
| 0531-018 | AGAGAGAGAGAGAGAGCTTG | 
| 834 | AGAGAGAGAGAGAGAGYT | 
| 836 | AGAGAGAGAGAGAGAGYA | 
| ISSR4 | GAGAGAGAGAGAGAGAYC | 
| ISSR6 | GTGTGTGTGTGTGTGTYA | 
| ISSR7 | AGAGAGAGAGAGAGAGYC | 
| ISSR31 | AGAGAGAGAGAGAGAGYC | 
| ISSR35 | CACACACACACACACARG | 
| ISSR50 | GAGAGAGAGAGAGAGAC | 
| P10-873 | GACAGACAGACAGACA | 
| 引物 | 序列 | 
|---|---|
| 0531-018 | AGAGAGAGAGAGAGAGCTTG | 
| 834 | AGAGAGAGAGAGAGAGYT | 
| 836 | AGAGAGAGAGAGAGAGYA | 
| ISSR4 | GAGAGAGAGAGAGAGAYC | 
| ISSR6 | GTGTGTGTGTGTGTGTYA | 
| ISSR7 | AGAGAGAGAGAGAGAGYC | 
| ISSR31 | AGAGAGAGAGAGAGAGYC | 
| ISSR35 | CACACACACACACACARG | 
| ISSR50 | GAGAGAGAGAGAGAGAC | 
| P10-873 | GACAGACAGACAGACA | 
| 接头与引物 | 引物序列(5’-3’) | 
|---|---|
| EcoR I 接头1 | CTCGTAGACTGCGTACC | 
| EcoR I 接头2 | AATTGGTACGCAGTCTAC | 
| HM 接头1 | GACGATGAGTCCTGAG | 
| HM 接头2 | CGCTCAGGACTCAT | 
| E00 | GACTGCGTACCAATTC | 
| MSP00 | GATGAGTCCTGAGCGG | 
| E34 | GACTGCGTACCAATTCAAT | 
| E38 | GACTGCGTACCAATTCACT | 
| E40 | GACTGCGTACCAATTCAGC | 
| E41 | GACTGCGTACCAATTCAGG | 
| E44 | GACTGCGTACCAATTCATC | 
| E46 | GACTGCGTACCAATTCATT | 
| E50 | GACTGCGTACCAATTCCAT | 
| E77 | GACTGCGTACCAATTCGTG | 
| MSP39 | GATGAGTCCTGAGCGGAGA | 
| MSP40 | GATGAGTCCTGAGCGGAGC | 
| MSP41 | GATGAGTCCTGAGCGGAGG | 
| MSP44 | GATGAGTCCTGAGCGGATC | 
| MSP50 | GATGAGTCCTGAGCGGCAT | 
| MSP59 | GATGAGTCCTGAGCGGCTA | 
| MSP60 | GATGAGTCCTGAGCGGCTC | 
| MSP61 | GATGAGTCCTGAGCGGCTG | 
| 接头与引物 | 引物序列(5’-3’) | 
|---|---|
| EcoR I 接头1 | CTCGTAGACTGCGTACC | 
| EcoR I 接头2 | AATTGGTACGCAGTCTAC | 
| HM 接头1 | GACGATGAGTCCTGAG | 
| HM 接头2 | CGCTCAGGACTCAT | 
| E00 | GACTGCGTACCAATTC | 
| MSP00 | GATGAGTCCTGAGCGG | 
| E34 | GACTGCGTACCAATTCAAT | 
| E38 | GACTGCGTACCAATTCACT | 
| E40 | GACTGCGTACCAATTCAGC | 
| E41 | GACTGCGTACCAATTCAGG | 
| E44 | GACTGCGTACCAATTCATC | 
| E46 | GACTGCGTACCAATTCATT | 
| E50 | GACTGCGTACCAATTCCAT | 
| E77 | GACTGCGTACCAATTCGTG | 
| MSP39 | GATGAGTCCTGAGCGGAGA | 
| MSP40 | GATGAGTCCTGAGCGGAGC | 
| MSP41 | GATGAGTCCTGAGCGGAGG | 
| MSP44 | GATGAGTCCTGAGCGGATC | 
| MSP50 | GATGAGTCCTGAGCGGCAT | 
| MSP59 | GATGAGTCCTGAGCGGCTA | 
| MSP60 | GATGAGTCCTGAGCGGCTC | 
| MSP61 | GATGAGTCCTGAGCGGCTG | 
| 引物 | Na | Ne | H | I | 多态位点 | 多态百分数/% | 
|---|---|---|---|---|---|---|
| 0531-018 | 1.6667±0.4924 | 1.4500±0.4135 | 0.2557±0.2122 | 0.3768±0.2990 | 8 | 66.67 | 
| 834 | 1.3750±0.5175 | 1.2920±0.4440 | 0.1579±0.2284 | 0.2277±0.3230 | 3 | 37.50 | 
| 836 | 1.5714±0.5354 | 1.3880±0.4392 | 0.2196±0.2246 | 0.3239±0.3189 | 4 | 57.14 | 
| ISSR31 | 1.5455±0.5222 | 1.4352±0.4498 | 0.2368±0.2349 | 0.3399±0.3322 | 6 | 54.55 | 
| ISSR35 | 1.8750±0.3536 | 1.5437±0.3451 | 0.3177±0.1789 | 0.4718±0.2447 | 7 | 87.50 | 
| ISSR4 | 1.2500±0.5000 | 1.2455±0.4910 | 0.1239±0.2477 | 0.1721±0.3443 | 1 | 25.00 | 
| ISSR50 | 1.6364±0.5045 | 1.4360±0.4343 | 0.2442±0.2193 | 0.3591±0.3074 | 7 | 63.64 | 
| ISSR6 | 1.6667±0.5164 | 1.4520±0.4422 | 0.2561±0.2217 | 0.3777±0.3121 | 4 | 66.67 | 
| ISSR7 | 1.5714±0.5345 | 1.4746±0.4929 | 0.2514±0.2479 | 0.3587±0.3464 | 4 | 57.14 | 
| P10-873 | 1.5000±0.5477 | 1.3709±0.4305 | 0.2098±0.2345 | 0.3045±0.3371 | 3 | 50.00 | 
| 引物 | Na | Ne | H | I | 多态位点 | 多态百分数/% | 
|---|---|---|---|---|---|---|
| 0531-018 | 1.6667±0.4924 | 1.4500±0.4135 | 0.2557±0.2122 | 0.3768±0.2990 | 8 | 66.67 | 
| 834 | 1.3750±0.5175 | 1.2920±0.4440 | 0.1579±0.2284 | 0.2277±0.3230 | 3 | 37.50 | 
| 836 | 1.5714±0.5354 | 1.3880±0.4392 | 0.2196±0.2246 | 0.3239±0.3189 | 4 | 57.14 | 
| ISSR31 | 1.5455±0.5222 | 1.4352±0.4498 | 0.2368±0.2349 | 0.3399±0.3322 | 6 | 54.55 | 
| ISSR35 | 1.8750±0.3536 | 1.5437±0.3451 | 0.3177±0.1789 | 0.4718±0.2447 | 7 | 87.50 | 
| ISSR4 | 1.2500±0.5000 | 1.2455±0.4910 | 0.1239±0.2477 | 0.1721±0.3443 | 1 | 25.00 | 
| ISSR50 | 1.6364±0.5045 | 1.4360±0.4343 | 0.2442±0.2193 | 0.3591±0.3074 | 7 | 63.64 | 
| ISSR6 | 1.6667±0.5164 | 1.4520±0.4422 | 0.2561±0.2217 | 0.3777±0.3121 | 4 | 66.67 | 
| ISSR7 | 1.5714±0.5345 | 1.4746±0.4929 | 0.2514±0.2479 | 0.3587±0.3464 | 4 | 57.14 | 
| P10-873 | 1.5000±0.5477 | 1.3709±0.4305 | 0.2098±0.2345 | 0.3045±0.3371 | 3 | 50.00 | 
| J | G | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | |
|---|---|---|---|---|---|---|---|---|---|---|
| J | 1.0000 | |||||||||
| G | 0.9625 | 1.0000 | ||||||||
| 2 | 0.9125 | 0.9500 | 1.0000 | |||||||
| 3 | 0.5125 | 0.4750 | 0.5000 | 1.0000 | ||||||
| 4 | 0.5750 | 0.5625 | 0.5875 | 0.8875 | 1.0000 | |||||
| 5 | 0.5875 | 0.5750 | 0.6000 | 0.8750 | 0.9875 | 1.0000 | ||||
| 6 | 0.5125 | 0.4750 | 0.5000 | 0.9750 | 0.8875 | 0.8750 | 1.0000 | |||
| 7 | 0.5000 | 0.4875 | 0.5125 | 0.9325 | 0.9250 | 0.9125 | 0.9375 | 1.0000 | ||
| 8 | 0.5250 | 0.5125 | 0.5375 | 0.9125 | 0.9250 | 0.9125 | 0.9125 | 0.9500 | 1.0000 | |
| 9 | 0.5250 | 0.4875 | 0.5125 | 0.9375 | 0.9000 | 0.8875 | 0.9375 | 0.9250 | 0.9750 | 1.0000 | 
| J | G | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | |
|---|---|---|---|---|---|---|---|---|---|---|
| J | 1.0000 | |||||||||
| G | 0.9625 | 1.0000 | ||||||||
| 2 | 0.9125 | 0.9500 | 1.0000 | |||||||
| 3 | 0.5125 | 0.4750 | 0.5000 | 1.0000 | ||||||
| 4 | 0.5750 | 0.5625 | 0.5875 | 0.8875 | 1.0000 | |||||
| 5 | 0.5875 | 0.5750 | 0.6000 | 0.8750 | 0.9875 | 1.0000 | ||||
| 6 | 0.5125 | 0.4750 | 0.5000 | 0.9750 | 0.8875 | 0.8750 | 1.0000 | |||
| 7 | 0.5000 | 0.4875 | 0.5125 | 0.9325 | 0.9250 | 0.9125 | 0.9375 | 1.0000 | ||
| 8 | 0.5250 | 0.5125 | 0.5375 | 0.9125 | 0.9250 | 0.9125 | 0.9125 | 0.9500 | 1.0000 | |
| 9 | 0.5250 | 0.4875 | 0.5125 | 0.9375 | 0.9000 | 0.8875 | 0.9375 | 0.9250 | 0.9750 | 1.0000 | 
| 模式 | 带型 | 条带数及比例 | ||
|---|---|---|---|---|
| HapⅡ | Msp Ⅰ | J | 9 | |
| 1 | 1 | Ⅰ(非甲基化) | 239 | 242 | 
| 1 | 0 | Ⅱ(半甲基化) | 102 | 155 | 
| 0 | 1 | Ⅲ(全甲基化) | 394 | 298 | 
| 0 | 0 | Ⅳ(超甲基化) | 408 | 448 | 
| 总扩增带数 | 735 | 695 | ||
| 总甲基化带数 | 904 | 901 | ||
| 全甲基化带数 | 802 | 746 | ||
| 总甲基化率/% | 79.09 | 78.83 | ||
| 全甲基化率/% | 70.17 | 65.27 | ||
| 半甲基化率/% | 8.92 | 13.56 | ||
| 模式 | 带型 | 条带数及比例 | ||
|---|---|---|---|---|
| HapⅡ | Msp Ⅰ | J | 9 | |
| 1 | 1 | Ⅰ(非甲基化) | 239 | 242 | 
| 1 | 0 | Ⅱ(半甲基化) | 102 | 155 | 
| 0 | 1 | Ⅲ(全甲基化) | 394 | 298 | 
| 0 | 0 | Ⅳ(超甲基化) | 408 | 448 | 
| 总扩增带数 | 735 | 695 | ||
| 总甲基化带数 | 904 | 901 | ||
| 全甲基化带数 | 802 | 746 | ||
| 总甲基化率/% | 79.09 | 78.83 | ||
| 全甲基化率/% | 70.17 | 65.27 | ||
| 半甲基化率/% | 8.92 | 13.56 | ||
| 模式 | 类型 | 带型 | 条带数 | 百分比/% | 甲基化变化 | |||
|---|---|---|---|---|---|---|---|---|
| 无变化 | A1 | 1 | 1 | 1 | 1 | 186 | 67.30 | 非甲基化----非甲基化 | 
| A2 | 1 | 0 | 1 | 0 | 42 | 半甲基化----半甲基化 | ||
| A3 | 0 | 1 | 0 | 1 | 307 | 全甲基化----全甲基化 | ||
| 去甲基化 | B1 | 1 | 0 | 1 | 1 | 21 | 18.87 | 半甲基化----非甲基化 | 
| B2 | 0 | 1 | 1 | 1 | 14 | 全甲基化----非甲基化 | ||
| B3 | 0 | 0 | 1 | 1 | 18 | 超甲基化----非甲基化 | ||
| B4 | 0 | 0 | 1 | 0 | 48 | 超甲基化----半甲基化 | ||
| B5 | 0 | 0 | 0 | 1 | 49 | 超甲基化----全甲基化 | ||
| 甲基化 | C1 | 1 | 1 | 1 | 0 | 11 | 13.46 | 非甲基化----半甲基化 | 
| C2 | 1 | 1 | 0 | 1 | 35 | 非甲基化----全甲基化 | ||
| C3 | 1 | 1 | 0 | 0 | 5 | 非甲基化----超甲基化 | ||
| C4 | 1 | 0 | 0 | 0 | 35 | 半甲基化----超甲基化 | ||
| C5 | 0 | 1 | 0 | 0 | 21 | 全甲基化----超甲基化 | ||
| 模式 | 类型 | 带型 | 条带数 | 百分比/% | 甲基化变化 | |||
|---|---|---|---|---|---|---|---|---|
| 无变化 | A1 | 1 | 1 | 1 | 1 | 186 | 67.30 | 非甲基化----非甲基化 | 
| A2 | 1 | 0 | 1 | 0 | 42 | 半甲基化----半甲基化 | ||
| A3 | 0 | 1 | 0 | 1 | 307 | 全甲基化----全甲基化 | ||
| 去甲基化 | B1 | 1 | 0 | 1 | 1 | 21 | 18.87 | 半甲基化----非甲基化 | 
| B2 | 0 | 1 | 1 | 1 | 14 | 全甲基化----非甲基化 | ||
| B3 | 0 | 0 | 1 | 1 | 18 | 超甲基化----非甲基化 | ||
| B4 | 0 | 0 | 1 | 0 | 48 | 超甲基化----半甲基化 | ||
| B5 | 0 | 0 | 0 | 1 | 49 | 超甲基化----全甲基化 | ||
| 甲基化 | C1 | 1 | 1 | 1 | 0 | 11 | 13.46 | 非甲基化----半甲基化 | 
| C2 | 1 | 1 | 0 | 1 | 35 | 非甲基化----全甲基化 | ||
| C3 | 1 | 1 | 0 | 0 | 5 | 非甲基化----超甲基化 | ||
| C4 | 1 | 0 | 0 | 0 | 35 | 半甲基化----超甲基化 | ||
| C5 | 0 | 1 | 0 | 0 | 21 | 全甲基化----超甲基化 | ||
| [1] | 中华人民共和国药典:2015年一部[S] 北京: 中国医药科技出版社, 2015: 161. | 
| [2] | 宋刚, 徐银, 史俊, 等. 茅苍术规模化组培快繁体系的建立[J]. 江西农业学报, 2018,30(9):63-67. | 
| [3] | 王红娟, 杨岚, 向增旭. 药用植物茅苍术工厂化育苗关键技术研究[J]. 药物生物技术, 2014,21(2):152-155. | 
| [4] | 高亚曼, 李妹芳, 冀芦沙. 珍珠半夏(Pinellia ternate)高效再生体系的建立及其遗传稳定性检测[J]. 分子植物育种, 2016,14(4):980-985. | 
| [5] | 王小利, 王茜, 舒健虹, 等. 氮胁迫下高羊茅基因组DNA甲基化的MSAP分析[J]. 基因组学与应用生物学, 2015,34(11):2362-2371. | 
| [6] | 苗徐静, 文壮, 文晓鹏. 草莓组培苗遗传稳定性的ISSR检测及DNA甲基化变异[J]. 分子植物育种, 2019,17(2):531-538. | 
| [7] | Tan M P. Analysis of DNA methylation of maize in response to osmotic and salt stress based on methylation-sensitive amplified polymorphism[J]. Plant Physiol Biochem, 2010,48:21-28. doi: 10.1016/j.plaphy.2009.10.005 URL | 
| [8] | 王聪聪, 邢世岩, 李际红, 等. 不同单株叶籽银杏DNA甲基化水平与模式的MSAP分析[J]. 核农学报, 2013,27(4):399-407. | 
| [9] | 许梦云, 吴沿友, 赵玉国, 等. 道地药材茅苍术的ISSR分析[J]. 河南农业科学, 2009(07):90-93. | 
| [10] | 王红娟. 茅苍术同源四倍体离体诱导与鉴定及其遗传变异研究[D]. 南京:南京农业大学, 2015: 2. | 
| [11] | 韩盼盼, 王红娟, 向增旭. 桔梗同源四倍体诱导及其基因组DNA甲基化差异分析[J]. 中国中药杂志, 2015,40(23):396-402. | 
| [12] | 刘福平. 植物体细胞无性系变异的遗传基础及主要影响因素[J]. 基因组学与应用生物学, 2010,29(6):1142-1147. | 
| [13] | 刘玲梅, 汤浩茹, 刘娟. 试管苗长期继代培养中的形态发生能力与遗传稳定性[J]. 生物技术通报, 2008,5:25-29. | 
| [14] | 聂琼, 文晓鹏. 火龙果组培苗体细胞无性系变异及其分子检测[J]. 果树学报, 2017, 34(12):1527-1529. | 
| [15] | 李卫东. 番木瓜组培苗生产体系的优化及质量监测体系的建立[D]. 海口:华南热带农业大学, 2006. | 
| [16] | Li X, Yu X, Wang N, et al. Genetic and epigenetic instabilities induced by tissue culture in wild barley (Hordeum brevisubulatum (Trin.) Link)[J]. Plant Cell Tissue and Organ Cult, 2007,90(2):153-157. doi: 10.1007/s11240-007-9224-5 URL | 
| [17] | Zemach A, Mcdaniel I E, Silva P, et al. Genome-wide evolutionary analysis of eukaryotic DNA methylation[J]. Science, 2010,328(5980):916-920. doi: 10.1126/science.1186366 URL | 
| [1] | LIU Xiaoying, WU Bijun, ZHANG Younan, HUANG Feilong, LIU Guoqiang. Genetic Diversity and Genetic Relationship Analysis of Longan Germplasm Resources Based on ISSR Markers [J]. Chinese Agricultural Science Bulletin, 2022, 38(31): 60-65. | 
| [2] | FANG Xueliang, FU Ming, CHEN Zheng, BAI Yunxiu, HE Ying, ZENG Hanlai. 5-Azacytidine Regulating Plant Gene Expression: Research Progress and Application Prospect [J]. Chinese Agricultural Science Bulletin, 2022, 38(13): 30-35. | 
| [3] | . Hemerocallis fulva: Direct Induction of Adventitious Bud and Plant Regeneration [J]. Chinese Agricultural Science Bulletin, 2019, 35(5): 64-69. | 
| [4] | . Apparent Genetic Effects Induced by Electromagnetic Radiation:Research Progress [J]. Chinese Agricultural Science Bulletin, 2018, 34(31): 43-48. | 
| [5] | Wang Jie,Xu Youxin,Diao Qiyu and Zhang Naifeng. Non-Mendelian Inheritance Patterns: Advances in Epigenetics and Its Application [J]. Chinese Agricultural Science Bulletin, 2016, 32(14): 37-43. | 
| [6] | Peng Jiao,Cui Jinteng,Wang Aixiang and Zhao Hewen. Building of the Phalaenopsis’ Subculture Multiplication System via Regenerating Adventitious Buds [J]. Chinese Agricultural Science Bulletin, 2015, 31(4): 162-166. | 
| [7] | . Effect of Successive Subculture Shoot Tips in Vitro of Lilium lancifolium on Cryopreservation [J]. Chinese Agricultural Science Bulletin, 2014, 30(16): 139-142. | 
| [8] | . DNA Methylation Under Stresses and Its Prospects in Plant Drought-resistant Breeding [J]. Chinese Agricultural Science Bulletin, 2013, 29(6): 6-11. | 
| [9] | . The Extraction of the Genomic DNA in Bitter Gourd and Optimization of ISSR Amplified System [J]. Chinese Agricultural Science Bulletin, 2013, 29(4): 88-93. | 
| [10] | Shen Fang, Yin Ling, Liu Zhenguo, Shen Jie, Ji Ting. Research progress on the caste differentiation in the honeybee [J]. Chinese Agricultural Science Bulletin, 2013, 29(32): 1-5. | 
| [11] | Wang Chunrong. Study on Rapid Micropropagation System of Euphorbia cotinifolia by Tissue Culture [J]. Chinese Agricultural Science Bulletin, 2013, 29(28): 60-65. | 
| [12] | . Study on Optimization Subculture Technique in Corylus heterophylla Fisch.×C. avellana L. [J]. Chinese Agricultural Science Bulletin, 2013, 29(1): 17-23. | 
| [13] | . Effect of Temperature, Subculture Cycle and Light on the Growth of Acer negundo ‘Aureomarginatum’ in vitro [J]. Chinese Agricultural Science Bulletin, 2012, 28(25): 209-212. | 
| [14] | . Involvement of DNA Methylation in Tree Development and Micropropagation [J]. Chinese Agricultural Science Bulletin, 2010, 26(24): 35-41. | 
| [15] | Zhai Yueting, Fu Yulan, Jiang Liang. Research of Influencing Factors in Multiple Shoot clumps Proliferation of Dendrobium huoshanense [J]. Chinese Agricultural Science Bulletin, 2010, 26(11): 258-260. | 
| Viewed | ||||||
| Full text |  | |||||
| Abstract |  | |||||